Do you mean the mysql system database, or a specific database/table that's in the NDB cluster engine? The mysql system database falls outside of the cluster realm, so each server has its own independent copy.
I would say though that for most purposes, you probably don't want to use NDB Cluster. It is suitable for very specific use cases, and is 'abused' in other situations.
These days, there are better solutions for many cases, including Galera cluster which is a synchronous replication mechanism in MariaDB 5.5 (-cluster) and above. It's not available in stock (Oracle) MySQL.